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This
form enables uploading of a file of SAGE tags, which are then matched
against tags previously extracted from known datasets. 10 base pair (bp)
tags for SAGE (17 base pair tags for longSAGE) were extracted from these
files, based on the criteria of 3' most CATG, and/or polyA tail and/or
poly A signals. (A polyA signal indicates a mature 3' untranslated region,
formed by polyadenylation of the pre-mRNA). This aids with assigning
tags to positions in the genome. All datasets with an asterix are updated weekly. Other datasets will be added as the
site develops. If there is a particular dataset that you would be interested
in seeing added to the site, please contact
us. To save your results, simply save the page and open in Microsoft
Excel.
The
file should be in the following tab-delimitedformat:
[yourlibraryidentifier_tagcount] [10 bp tag SAGE
or 17 bp tag longSAGE]
For
example:
mycortexlibrary_13 TTGGCGCTAG
mycortexlibrary_25 GTAAGCTGTA
mycortexlibrary_40 CCCTGAACAA
An example file can be found here.
Details
on the datasets used.
NCBI Reference Sequence Collection : SAGE
The NCBI Reference Sequence Collection is divided into five groups, partially to aid with determining higher quality matches, and partially to aid with speed. These are large databases and it would not be feasible to implement them as one database.
Reference
Sequence : reviewed. The RefSeq record has been reviewed by
NCBI staff. The review process includes reviewing available sequence
data and frequently also includes a review of the literature. The genomic/mRNA/protein
RefSeq records may have expanded sequence and annotation including addition
of pubications and features, as deemed relevant. This dataset is the smallest of all of the RefSeq datasets.
[111 tags as of 23/05/2003]
Reference sequence : provisional. The RefSeq record has not
yet been subject to individual review. The sequence-to-gene name associations
have been established by outside collaborators and NCBI staff.
[10,846 tags as of 23/05/2003]
Reference
Sequence : predicted. Some aspect of the RefSeq record is predicted
and there is supporting evidence that the locus is valid. The existence
of the mRNA is supported by existing cDNA, EST, and/or closely related
homologous sequences. For mRNA/protein records, this status code primarily
indicates that while a mRNA provides experimental evidence for the locus,
the protein has been predicted.
[5,033 tags as of 23/05/2003]
Reference
Sequence : model. This identifies the contig (NT_ accessions),
mRNA (XM_), non-coding transcript (XR_) RefSeq records provided by the
NCBI Genome Annotation process. These records are provided via automated
processing.
[9,191 tags as of 23/05/2003]
Reference
Sequence : known. Contains all reviewed, provisional and predicted
records, including genomic regions (NG_) and those from the complete
genomes project. Useful for quick identification of an entire SAGE library.
[15,972 tags as of 23/05/2003]
LongSAGE
: reviewed. As for the SAGE reviewed, but composed of 17 bp
(as opposed to 10 bp) tags
LongSAGE
: provisional. As for the SAGE provisional, but composed of 17 bp
(as opposed to 10 bp) tags
LongSAGE
: predicted. As for the SAGE predicted, but composed of 17 bp
(as opposed to 10 bp) tags
LongSAGE
: reviewed. As for the SAGE reviewed, but composed of 17 bp
(as opposed to 10 bp) tags
LongSAGE
: model. As for the SAGE model, but composed of 17 bp
(as opposed to 10 bp) tags
LongSAGE
: known. As for the SAGE known, but composed of 17 bp
(as opposed to 10 bp) tags
NFkB
Database description.
Genes genes related to NFkB mediated signal transduction. Provides information on the expression profiles of the Rel/NFkB/IkB family, marker genes
responsive to NFkB Signaling, related ligands/receptors and other genes involved in
NFkB signal transduction
| Unigene |
Accession |
Description |
| Mm.2444 |
X01023 |
c-myc
Mouse normal c-myc gene and translocated homologue from J558 plasmocytoma
cells |
| Mm.4869 |
X15842 |
c-rel
Murine mRNA for c-rel protein |
| Mm.5245 |
M87862 |
ELAM-1
(E-selectin) Mus musculus E-selectin protein mRNA |
| Mm.1238 |
M13926 |
G-CSF
Colony stimulating factor, granulocyte |
| Mm.28973 |
M31585 |
ICAM-1
Mouse (clone lambda-c5e) intercellular adhesion molecule 1 |
| Mm.168 |
V00756 |
IFN-Gamma
E Interferon beta, fibroblast |
| Mm.8884 |
U36277 |
IGamma
N BGamma D (mad3) Mus musculus I-kappa B alpha chain |
| Mm.3996 |
U12473 |
IKK-Gamma
D Conserved helix-loop-helix ubiquitous kinase |
| Mm.28269 |
AF026524 |
IKK-Gamma
E Inhibitor of kappa light polypeptide gene enhancer in B-cells,
kinase beta |
| Mm.12967 |
AF069542 |
IKK-\Gamma
J Inhibitor of kappa light polypeptide gene enhancer in B-cells,
kinase gamma |
| Mm.37672 |
AB016589 |
IKK-i
Mus musculus IKK-i mRNA for inducible IKappaB kinase, complete cds |
| Mm.14190 |
K02292 |
IL-2
Mouse interleukin-2 |
| Mm.1019 |
J03783 |
IL-6
Interleukin 6 (interferon, beta 2) |
| Mm.2893 |
M92649 |
iNOS
Inducible nitric oxide synthase |
| Mm.1246 |
NM_008390 |
IRF-1
Interferon regulatory factor 1 |
| Mm.89123 |
L13763 |
MCP-1
(emb, pou1, Gp70, Scya2) Mus musculus transcription regulatory protein
MCP-1 (POU 1) mRNA |
| Mm.3420 |
M57999 |
NFGamma
N B1 Nuclear factor of kappa light chain gene enhancer in B-cells
1 p105 |
| Mm.20225 |
AF155373 |
NFGamma
N B2 Mus musculus nuclear factor kappa B subunit p100 |
| N/A |
AF143094 |
NIK
Mus musculus NF-kappaB inducing kinase (Nik) |
| Mm.3337 |
M87861 |
P-selectin
Mus musculus P-selectin protein mRNA |
| Mm.1293 |
NM_013693 |
TNF-Gamma
D Mus musculus tumor necrosis factor (Tnf) |
| Mm.87787 |
M16819 |
TNF-Gamma
E Mouse tumor necrosis factor-beta mRNA |
| Mm.1021 |
M84487 |
VCAM-1
Vascular cell adhesion molecule 1 |
| Mm.103618 |
M12481 |
Gamma
E -actin Cytoplasmic beta-actin |
| Mm.5289 |
M32599 |
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase |
Gene Families
Cell adhesion genes. These SAGE tags were extracted from a collection which includes cell adhesion and extracellular matrix proteins, Integrins, Cadherin and Catenins, Selectins, Immunoglobulin (Ig) superfamily, Extracellular matrix proteins, Matrix metalloproteinases, Serine proteinases, Cystein proteinases, and Protease inhibitors.
Ensembl genes. These SAGE tags were extracted from the main gene set as predicted by Ensembl, which corresponds either to near full-length cDNA and/or protein sequences already available in the public sequence databases (known genes), plus novel evidence-based predictions (novel genes). The tags were taken from the mouse genome assembly version 3 [MGSC 11.3.1]. The id returned is the ensembl internal id.
Microarray stem cell genes. These SAGE tags were extracted from GEArray S Series Mouse Stem Cell Array from SuperArray. This array is designed to profile the expression of genes known to be important for the identification, growth and differentiation of mouse stem cells. The array contains over 260 known genes that encode markers of stem cells and their various stages of differentiation, growth factors and cytokines, extracellular matrix markers and other proteins. A total of 233 tags were extracted from this gene list.
| NM_007558.1 | Mus musculus bone morphogenetic protein 8a (Bmp8a), mRNA" | y | n | TCATTAATCC |
| BC042611.1 | Mus musculus, bone morphogenetic protein receptor, type 1A, clone MGC:36094 IMAGE:5364272, mRNA, complete cds" | y | n | TGAAAAGAAA |
| NM_009612.1 | Mus musculus activin A receptor, type II-like 1 (Acvrl1), mRNA" | y | n | AAAAAGGTGG |
| NM_010612.2 | Mus musculus kinase insert domain protein receptor (Kdr), mRNA" | y | n | ACCCAAGAAT |
| NM_008729.1 | Mus musculus catenin delta 2 (Catnd2), mRNA" | y | n | CATACACCAC |
| NM_009519.1 | Mus musculus wingless-related MMTV integration site 11 (Wnt11), mRNA" | y | n | GAACCACTAA |
| BC033459.1 | Mus musculus, Similar to numb gene homolog (Drosophila), clone MGC:28234 IMAGE:3991630, mRNA, complete cds" | y | n | AAGGGCTGTT |
| BQ715902.1 | BQ715902 AGENCOURT_8482887 NIH_MGC_129 Mus musculus cDNA clone IMAGE:6306172 5', mRNA sequence" | y | n | GTGGTGGGGG |
| NM_009522.1 | Mus musculus wingless-related MMTV integration site 3A (Wnt3a), mRNA" | y | n | GGGACACAGT |
| BC028256.1 | Mus musculus, Similar to erbb2 interacting protein, clone IMAGE:4988135, mRNA, partial cds" | y | n | GCTATTTGGA |
| NM_011858.1 | Mus musculus odd Oz/ten-m homolog 4 (Drosophila) (Odz4), mRNA | n | n | CTCTGGAAAT |
| NM_010896.1 | Mus musculus neurogenin 1 (Neurog1), mRNA | n | n | CACAACCTCA |
| AK081351.1 | Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130009G16 product:gap junction membrane channel protein alpha 7, full insert sequence | n | n | AAGAGGATCC |
| AK079100.1 | Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330187D14 product:fibroblast growth factor 14, full insert sequence | n | n | CACACACATC |
| AK050240.1 | Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730029L05 product:cyclin-dependent kinase inhibitor 1B (P27), full insert sequence | n | n | GGAGGGTTTC |
| AK049177.1 | Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011H01 product:phosphatidylethanolamine binding protein, full insert sequence | n | n | GGACCAGACT |
| AK043202.1 | Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730069C18 product:superiorcervical ganglia, neural specific 10, full insert sequence | n | n | AGCGAGGGAA |
| AK041246.1 | Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530094G04 product:activin receptor IIA, full insert sequence | n | n | ATATAAGATG |
| AK033175.1 | Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030453F01 product:vimentin, full insert sequence | n | n | CAAGATTGAA |
| AK031265.1 | Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930439E13 product:cadherin 3, full insert sequence | n | n | GGTGATGGAG |
| AK030713.1 | Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730403E12 product:SRY-box containing gene 6, full insert sequence | n | n | CCAAAATAAT |
| AK028989.1 | Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732479B04 product:SRY-box containing gene 4, full insert sequence | n | n | ACAGGCACGA |
| AK084544.1 | Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330013N04 product:myosin light chain, alkali, cardiac atria, full insert sequence | n | n | ACCGAAAGGT |
| AK008922.1 | Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210414E06 product:FIBROBLAST GROWTH FACTOR-22 PRECURSOR (FGF-22) homolog [Mus musculus], full insert sequence | n | n | GGCTCTGCTT |
| NM_008957.1 | Mus musculus patched homolog (Ptch), mRNA | n | n | TCAGGTGTGA |
| NM_008958.1 | Mus musculus patched homolog 2 (Ptch2), mRNA | n | n | ACTGTGGCCC |
| NM_008746.3 | Mus musculus neurotrophic tyrosine kinase, receptor, type 3 (Ntrk3), mRNA | n | n | GATGAAGCAA |
| NM_019448.1 | Mus musculus DNA (cytosine-5-)-methyltransferase 3-like (Dnmt3l), mRNA | n | n | TTTCTCTGAA |
| NM_011123.1 | Mus musculus proteolipid protein (myelin) (Plp), mRNA | n | n | AAATTATTGG |
| NM_011400.1 | Mus musculus solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA | n | n | AGAAGGACCT |
| NM_010205.1 | Mus musculus fibroblast growth factor 8 (Fgf8), mRNA | n | n | AAGCGCCTGC |
| NM_009235.1 | Mus musculus SRY-box containing gene 15 (Sox15), mRNA | n | n | CCAGTAACCC |
| NM_030614.1 | Mus musculus fibroblast growth factor 16 (Fgf16), mRNA | n | n | TCCAGAGATC |
| NM_030610.1 | Mus musculus fibroblast growth factor 20 (Fgf20), mRNA | n | n | GAAACACGGG |
| NM_021272.1 | Mus musculus fatty acid binding protein 7, brain (Fabp7), mRNA | n | n | ATAAATCCCC |
| NM_013627.1 | Mus musculus paired box gene 6 (Pax6), mRNA | n | n | AATTCAAAAA |
| NM_013565.1 | Mus musculus integrin alpha 3 (Itga3), mRNA | n | n | GTTCTCTGTG |
| NM_011693.1 | Mus musculus vascular cell adhesion molecule 1 (Vcam1), mRNA | n | n | GTACTGTACG |
| NM_010563.1 | Mus musculus internexin neuronal intermediate filament protein, alpha (Ina), mRNA | n | n | ACGCATCTGT |
| NM_010198.1 | Mus musculus fibroblast growth factor 11 (Fgf11), mRNA | n | n | TACCGGGAGC |
| NM_009887.1 | Mus musculus cerberus 1 homolog (Xenopus laevis) (Cer1), mRNA | n | n | AACAGTATTA |
| NM_008401.1 | Mus musculus integrin alpha M (Itgam), mRNA | n | n | ATGAATGAAG |
| NM_008107.1 | Mus musculus growth differentiation factor 1 (Gdf1), mRNA | n | n | TTTTATTGGT |
| NM_008055.1 | Mus musculus frizzled homolog 4 (Drosophila) (Fzd4), mRNA | n | n | CCTAATGAGA |
| NM_007989.1 | Mus musculus forkhead box H1 (Foxh1), mRNA | n | n | TAAAAAAAAA |
| NM_008937.1 | Mus musculus prospero-related homeobox 1 (Prox1), mRNA | n | n | GATATGTTGT |
| NM_008900.1 | Mus musculus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA | n | n | ACGCCCCCTG |
| NM_008899.1 | Mus musculus POU domain, class 3, transcription factor 2 (Pou3f2), mRNA | n | n | TGCAAGCTGA |
| NM_009368.1 | Mus musculus transforming growth factor, beta 3 (Tgfb3), mRNA | n | n | GATGACTTCA |
| NM_009354.1 | Mus musculus telomerase reverse transcriptase (Tert), mRNA | n | n | AAAAAAAAAA |
| AY057908.1 | Mus musculus brain-derived neurotrophic factor BDNF1 (Bdnf) mRNA, complete cds, alternatively spliced | n | n | TAAAACAAGA |
| NM_021458.1 | Mus musculus frizzled homolog 3 (Drosophila) (Fzd3), mRNA | n | n | CTTATTTTAT |
| NM_021457.1 | Mus musculus frizzled homolog 1, (Drosophila) (Fzd1), mRNA | n | n | ACGCTGATTG |
| NM_021359.1 | Mus musculus integrin beta 6 (Itgb6), mRNA | n | n | ACCGGAAGGA |
| NM_020013.1 | Mus musculus fibroblast growth factor 21 (Fgf21), mRNA | n | n | GTAGAGCCTT |
| NM_013607.1 | Mus musculus myosin heavy chain 11, smooth muscle (Myh11), mRNA | n | n | TCAGGGAAAA |
| NM_013584.1 | Mus musculus leukemia inhibitory factor receptor (Lifr), mRNA | n | n | TATCAGCCGC |
| NM_013518.1 | Mus musculus fibroblast growth factor 9 (Fgf9), mRNA | n | n | CGGTGGGTTC |
| NM_008711.1 | Mus musculus noggin (Nog), mRNA | n | n | GTGTGTAAGC |
| NM_009756.1 | Mus musculus bone morphogenetic protein 10 (Bmp10), mRNA | n | n | ATTGATGATT |
| NM_011577.1 | Mus musculus transforming growth factor, beta 1 (Tgfb1), mRNA | n | n | ATTGTGCGCT |
| NM_011057.1 | Mus musculus platelet derived growth factor, B polypeptide (Pdgfb), mRNA | n | n | TGCCCTTCAG |
| NM_010919.1 | Mus musculus NK2 transcription factor related, locus 2 (Drosophila) (Nkx2-2), mRNA | n | n | TACACGTTCT |
| NM_010577.1 | Mus musculus integrin alpha 5 (fibronectin receptor alpha) (Itga5), mRNA | n | n | ATCCCGAAGA |
| NM_010560.1 | Mus musculus interleukin 6 signal transducer (Il6st), mRNA | n | n | CCGCAGTGAA |
| NM_010512.1 | Mus musculus insulin-like growth factor 1 (Igf1), mRNA | n | n | CCCAAGACTC |
| NM_010207.1 | Mus musculus fibroblast growth factor receptor 2 (Fgfr2), mRNA | n | n | CCACCTTTGA |
| NM_010197.1 | Mus musculus fibroblast growth factor 1 (Fgf1), mRNA | n | n | TACAAACCCA |
| NM_010066.1 | Mus musculus DNA methyltransferase (cytosine-5) 1 (Dnmt1), mRNA | n | n | GGCAAGCAGG |
| NM_010067.1 | Mus musculus DNA methyltransferase 2 (Dnmt2), mRNA | n | n | AATAATATAA |
| NM_010052.1 | Mus musculus delta-like 1 homolog (Drosophila) (Dlk1), mRNA | n | n | ATAATGAATA |
| NM_009878.1 | Mus musculus cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) (Cdkn2d), mRNA | n | n | AGTTCATTTT |
| NM_009868.1 | Mus musculus cadherin 5 (Cdh5), mRNA | n | n | ATCGACGTGA |
| NM_009867.1 | Mus musculus cadherin 4 (Cdh4), mRNA | n | n | ACAGTCCCTA |
| NM_008808.1 | Mus musculus platelet derived growth factor, alpha (Pdgfa), mRNA | n | n | TGCGACCTCC |
| NM_007560.1 | Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA | n | n | TTGCTTTCTA |
| NM_007554.1 | Mus musculus bone morphogenetic protein 4 (Bmp4), mRNA | n | n | TTGTACCTGG |
| NM_007553.1 | Mus musculus bone morphogenetic protein 2 (Bmp2), mRNA | n | n | GTTGTGGAGG |
| NM_007394.1 | Mus musculus activin A receptor, type 1 (Acvr1), mRNA | n | n | TTCCAGGGGG |
| NM_008469.1 | Mus musculus keratin complex 1, acidic, gene 15 (Krt1-15), mRNA | n | n | CTGCTGGACA |
| NM_008404.1 | Mus musculus integrin beta 2 (Itgb2), mRNA | n | n | AGTTATCATA |
| NM_008402.1 | Mus musculus integrin alpha V (Itgav), mRNA | n | n | AGAATGGCGA |
| NM_008380.1 | Mus musculus inhibin beta-A (Inhba), mRNA | n | n | ATTGTGGAGG |
| NM_008127.1 | Mus musculus gap junction membrane channel protein beta 4 (Gjb4), mRNA | n | n | AAAAAAAAAA |
| NM_008058.1 | Mus musculus frizzled homolog 8 (Drosophila) (Fzd8), mRNA | n | n | TGCCTAGTAG |
| NM_008057.1 | Mus musculus frizzled homolog 7 (Drosophila) (Fzd7), mRNA | n | n | GTAGGGAGAG |
| NM_008007.1 | Mus musculus fibroblast growth factor 3 (Fgf3), mRNA | n | n | GCAAGATGGA |
| NM_008005.1 | Mus musculus fibroblast growth factor 18 (Fgf18), mRNA | n | n | ACAAAGGACT |
| NM_008816.1 | Mus musculus platelet/endothelial cell adhesion molecule (Pecam), mRNA | n | n | TTGGGTATAC |
| NM_008716.1 | Mus musculus Notch gene homolog 3, (Drosophila) (Notch3), mRNA | n | n | GAGAGGAATA |
| NM_008634.1 | Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA | n | n | TACAGAAGAT |
| NM_008632.1 | Mus musculus microtubule-associated protein 2 (Mtap2), mRNA | n | n | AGCTCTTGGC |
| NM_008501.1 | Mus musculus leukemia inhibitory factor (Lif), mRNA | n | n | GCTCCCTGAT |
| NM_009525.1 | Mus musculus wingless-related MMTV integration site 5B (Wnt5b), mRNA | n | n | GGCTTGAGAG |
| NM_009523.1 | Mus musculus wingless-related MMTV integration site 4 (Wnt4), mRNA | n | n | CGGGTGGAGT |
| NM_009382.1 | Mus musculus thymus cell antigen 1, theta (Thy1), mRNA | n | n | AGCTCCAATA |
| NM_009351.1 | Mus musculus telomerase associated protein 1 (Tep1), mRNA | n | n | TGCTTCCGGG |
| NM_009237.1 | Mus musculus SRY-box containing gene 3 (Sox3), mRNA | n | n | TACCTGCCAC |
| NM_009200.1 | Mus musculus solute carrier family 1, member 6 (Slc1a6), mRNA | n | n | TTCTGTGTGG |
| NM_007614.1 | Mus musculus catenin beta (Catnb), mRNA | n | n | TGTGGAAGTT |
| NM_023653.1 | Mus musculus wingless-related MMTV integration site 2 (Wnt2), mRNA | n | n | AAAAAAAAAA |
| BI251855.1 | BI251855 602995319F1 NCI_CGAP_Mam5 Mus musculus cDNA clone IMAGE:5150981 5', mRNA sequence | n | n | TGATACAATT |
| AJ252157.1 | MMU252157 Mus musculus mRNA for forkhead protein FKHR (Fkhr gene) | n | n | ATTGCTCTGT |
| AF033585.2 | AF033585 Mus musculus frizzled-9 protein (Mfz9) mRNA, partial cds | n | n | CAGGGAGTGG |
| AF092734.1 | AF092734 Mus musculus growth/differentiation factor 11 mRNA, partial cds | n | n | TTTTTCCACA |
| AJ010604.1 | MMU010604 Mus musculus mRNA for transcription factor L-Sox5 | n | n | TGTATTTGAT |
| AF059176.1 | AF059176 Mus musculus EGF-like growth factor receptor ErbB4 extracellular domain mRNA, partial cds | n | n | AACTTCAATG |
| AF056187.1 | AF056187 Mus musculus insulin-like growth factor I receptor mRNA, complete cds | n | n | GGCCTCTGCA |
| D32210.1 | Mus musculus (Notch2) mRNA, complete cds | n | n | AAGAGTAAAA |
| AF001286.1 | AF001286 Mus musculus OCAM-GPI protein precursor mRNA, complete cds | n | n | CTTTCCCAGT |
| X53176.1 | MMIA4 Mouse integrin alpha-4 mRNA | n | n | CTTGATGTTG |
| L24755.1 | MUSBMP1A Mus musculus bone morphogenetic protein (Bmp-1) mRNA, complete cds | n | n | CCCAGTTCGG |
| M60778.1 | MUSLFA1 Mouse lymphocyte function-associated molecule-1 alpha subunit (LFA-1) mRNA, complete cds | n | n | CCACCGTGTA |
| M25937.1 | MUSGFAPA Mouse glial fibrillary acidic protein mRNA, 3' end | n | n | TGAAACTTGG |
| L04678.1 | MUSBE4SUBX Mouse integrin beta 4 subunit mRNA | n | n | TAACCAAAAA |
| NM_010929.1 | Mus musculus Notch gene homolog 4, (Drosophila) (Notch4), mRNA" | y | y | GATAATAAAG |
| BC010200.1 | Mus musculus, similar to fibroblast growth factor receptor 1, clone MGC:11564 IMAGE:3967874, mRNA, complete cds" | y | y | GGGGAGACGC |
| NM_011058.1 | Mus musculus platelet derived growth factor receptor, alpha polypeptide (Pdgfra), mRNA" | y | y | TTTTGTTTTA |
| BC029203.1 | Mus musculus, clone MGC:36792 IMAGE:4506903, mRNA, complete cds" | y | y | CTTATGAGTT |
| BC018238.1 | Mus musculus, fibroblast growth factor 13, clone MGC:25467 IMAGE:4481123, mRNA, complete cds" | y | y | TACAGGCAGT |
| AF508809.1 | Mus musculus notch 1 protein mRNA, complete cds" | y | y | CCTAATAGAT |
| NM_021334.1 | Mus musculus integrin alpha X (Itgax), mRNA" | y | y | TTATCCTCAT |
| NM_008104.1 | Mus musculus glial cells missing homolog 2 (Drosophila) (Gcm2), mRNA" | y | y | TGACTATTCC |
| NM_008126.1 | Mus musculus gap junction membrane channel protein beta 3 (Gjb3), mRNA" | y | y | CGTATCCTGT |
| NM_010580.1 | Mus musculus integrin beta 5 (Itgb5), mRNA" | y | y | AACCTCTGAA |
| BC002148.1 | Mus musculus, clone MGC:7265 IMAGE:3484864, mRNA, complete cds" | y | y | AGCCAAAGGA |
| NM_013566.1 | Mus musculus integrin beta 7 (Itgb7), mRNA" | y | y | CAGCCAGCGG |
| M81342.1 | MUSMFR3 BALB/c fibroblast growth factor receptor 3 (mFR3) mRNA, complete cds" | y | y | AAAAAAAAAA |
| NM_008003.1 | Mus musculus fibroblast growth factor 15 (Fgf15), mRNA" | y | y | ACTTGTTTTC |
| AB038697.1 | Mus musculus mRNA for Olig2 bHLH protein, complete cds" | y | y | CGCGCTCCCT |
| AB038696.1 | Mus musculus mRNA for Olig1 bHLH protein, complete cds" | y | y | CCATCGGTGT |
| X15052.1 | MMNCAMR3 Mouse mRNA for 3'-end of NCAM-140 and NCAM-180 isoforms | y | y | CCCAGGGTCT |
| NM_016701.2 | Mus musculus nestin (Nes), mRNA" | y | y | CCCAGAGGAG |
| NM_010068.1 | Mus musculus DNA methyltransferase 3B (Dnmt3b), mRNA" | y | y | TTACCATTTT |
| M92416.1 | MUSFGFAB Mus musculus fibroblast growth factor (Fgf6) mRNA, 3' end" | y | y | TCCCAGCAAG |
| NM_016958.1 | Mus musculus keratin complex 1, acidic, gene 14 (Krt1-14), mRNA" | y | y | CTGCTCAGGC |
| NM_010663.1 | Mus musculus keratin complex 1, acidic, gene 17 (Krt1-17), mRNA" | y | y | GTGACAAAAA |
| NM_008124.2 | Mus musculus gap junction membrane channel protein beta 1 (Gjb1), mRNA" | y | y | TCGGTGGGGA |
| AF276754.1 | AF276754 Mus musculus preproglucagon mRNA, complete cds" | y | y | ACCACCTGGT |
| AF275367.1 | AF275367 Mus musculus epidermal growth factor receptor (Egfr) mRNA, complete cds" | y | y | TTGATCACAG |
| NM_007557.1 | Mus musculus bone morphogenetic protein 7 (Bmp7), mRNA" | y | y | AATGAAAAAA |
| NM_133654.1 | Mus musculus CD34 antigen (Cd34), mRNA" | y | y | TGCTCCCTTG |
| BC030485.1 | Mus musculus, fibroblast growth factor 12, clone MGC:40856 IMAGE:5369273, mRNA, complete cds" | y | y | ATAGCAATTT |
| NM_009818.1 | Mus musculus catenin alpha 1 (Catna1), mRNA" | y | y | CTTCCCTGTT |
| X65506.1 | MMMHRA1 M.musculus mRNA for type I keratin (MHR a-1) | y | y | CAAAACCAGG |
| NM_016673.1 | Mus musculus ciliary neurotrophic factor receptor (Cntfr), mRNA" | y | y | AGAAAAAAAA |
| BC038365.1 | Mus musculus, Similar to nerve growth factor receptor, clone MGC:35588 IMAGE:5367638, mRNA, complete cds" | y | y | TTCCCTGACA |
| NM_013611.2 | Mus musculus nodal (Nodal), mRNA" | y | y | GTGGACTTTA |
| NM_011393.1 | Mus musculus solute carrier family 1, member 2 (Slc1a2), mRNA" | y | y | AGTATTCCGC |
| NM_146007.1 | Mus musculus procollagen, type VI, alpha 2 (Col6a2), mRNA" | y | y | CCCAATGGCC |
| NM_172647.1 | Mus musculus F11 receptor (F11r), mRNA | n | y | GGGACAGTTT |
| NM_008935.1 | Mus musculus prominin-like 1 (Proml1), mRNA | n | y | AATGAACAGA |
| NM_008814.1 | Mus musculus insulin promoter factor 1, homeodomain transcription factor (Ipf1), mRNA | n | y | AAGTGGAAAA |
| NM_008907.1 | Mus musculus peptidylprolyl isomerase A (Ppia), mRNA | n | y | GAGCGTTTTG |
| NM_009371.2 | Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA | n | y | TATTCAAATA |
| AK090263.1 | Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630030I18 product:ISL1 transcription factor, LIM/homeodomain, (islet-1), full insert sequence | n | y | TCATTTGACT |
| AK090132.1 | Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched library, clone:G431002P10 product:DNA methyltransferase 3A, full insert sequence | n | y | AGCAGTGGTC |
| AK089780.1 | Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830019G17 product:interleukin 6, full insert sequence | n | y | GGTCTCTCTC |
| AK082814.1 | Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330026I20 product:fibroblast growth factor 4, full insert sequence | n | y | GACTGATGGG |
| AK077555.1 | Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730446E06 product:fibroblast growth factor 17, full insert sequence | n | y | AAGTTTCTGA |
| AK077477.1 | Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730419J04 product:insulin-like growth factor binding protein 3, full insert sequence | n | y | CGCTGTACAG |
| AK052447.1 | Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430024L03 product:sonic hedgehog homolog, (Drosophila), full insert sequence | n | y | TTCTTGGAAA |
| AK045267.1 | Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130053I21 product:fibroblast growth factor 10, full insert sequence | n | y | CACCCTCGCT |
| AK045226.1 | Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130049I05 product:CD44 antigen, full insert sequence | n | |
